Yesterday: (last couple days) Continuing with paper writing - very slow progress. Started writing up the methodology. May need to re-evaluate how I'm using the approximate maximal cliques, and how best to justify it.
Today: Continue re-evaluating exactly how the approximate maximal cliques is being used, and justification for why its worthwhile in this situation. Write up how the distance matrix works, what it achieves, etc. Include the notes from Faramarz.
Roadblocks: N/A
Where Does this Fit In: Writing up the process clarifies exactly what is going on, and ensures validation of the approach taken once shared/distributed with others.